Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold744
Parameters: 2 7 7 80 10 50 1000
Length:  48779

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6399--6615
40
5.5
39
84
4
258
23
22
28
25
1.99
6843--6884
22
1.9
22
85
9
59
33
9
14
42
1.78
9928--10012
6
14.3
6
76
11
68
77
1
7
14
1.03
9933--10012
31
2.7
30
83
9
103
78
1
6
13
0.99
9950--9999
25
2.0
25
92
4
82
78
0
4
18
0.91
16503--16533
15
2.1
14
94
5
53
54
6
3
35
1.42
16520--16588
21
3.4
20
71
16
70
55
7
1
36
1.37
18123--18155
13
2.6
13
90
4
50
48
12
0
39
1.40
18439--18469
15
2.1
14
94
5
53
54
6
3
35
1.42
18456--18524
21
3.4
20
71
16
70
55
7
1
36
1.37
20059--20091
13
2.6
13
90
4
50
48
12
0
39
1.40
28389--28614
50
4.5
49
78
8
213
24
17
26
30
1.97
28389--28614
101
2.3
100
83
6
262
24
17
26
30
1.97
28714--28765
25
2.0
26
81
11
61
40
1
21
36
1.64
38601--38723
28
4.4
28
86
2
158
33
26
12
27
1.92
38600--38723
56
2.2
57
86
2
180
33
27
12
27
1.92
46880--47001
28
4.4
28
90
3
176
33
27
12
26
1.92

Tables:   1

The End!