Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold586
Parameters: 2 7 7 80 10 50 1000
Length:  37018

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5557--5634
26
2.9
27
84
7
95
33
21
24
20
1.97
5557--5646
26
3.3
26
81
10
94
33
24
23
18
1.97
5756--5837
28
2.9
30
79
17
104
31
8
23
36
1.85
13367--13456
27
3.2
27
85
7
119
32
23
24
20
1.98
13563--13651
27
3.2
27
92
4
142
31
7
29
31
1.86
17292--17338
18
2.7
17
80
6
58
29
12
14
42
1.83
21627--21670
22
2.0
22
100
0
88
36
22
13
27
1.92
25630--25697
27
2.5
28
95
2
120
32
27
13
26
1.93
29739--29795
9
5.9
9
73
15
51
35
8
21
35
1.84
29737--29799
20
3.2
20
95
0
117
36
12
19
31
1.89
29856--29971
23
4.8
24
83
11
148
26
20
22
30
1.98
30164--30227
31
2.1
31
87
0
92
34
14
25
26
1.94

Tables:   1

The End!