Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3782
Parameters: 2 7 7 80 10 50 1000
Length:  20147

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2135--2204
3
23.3
3
74
11
63
31
1
5
61
1.28
2146--2207
23
2.8
22
87
4
81
32
1
8
58
1.37
2170--2215
23
2.0
23
82
0
56
30
4
10
54
1.55
15093--15432
44
7.8
44
74
9
259
28
18
24
28
1.98
15099--15258
87
1.8
88
84
6
218
30
17
23
28
1.97
14971--15483
217
2.4
214
96
2
938
30
18
23
28
1.98
14920--15421
173
2.9
173
74
11
458
29
19
23
27
1.98
15494--15550
30
1.9
30
100
0
114
26
22
19
31
1.98
16926--16992
3
22.3
3
73
11
57
31
1
5
61
1.29
16932--17003
23
3.1
23
82
7
56
31
4
9
54
1.52
17017--17056
22
1.9
21
85
10
55
25
5
0
70
1.08
17024--17067
22
2.0
22
86
8
63
27
2
0
70
0.99
19333--19385
14
3.6
14
73
9
52
37
5
9
47
1.60
19329--19424
30
3.1
30
85
7
138
33
4
9
53
1.52

Tables:   1

The End!