Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3526
Parameters: 2 7 7 80 10 50 1000
Length:  30297

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
582--638
30
1.9
29
92
3
96
12
15
15
56
1.68
3348--3523
46
3.8
46
79
12
207
20
21
29
28
1.98
3346--3516
93
1.8
93
94
0
306
21
22
29
27
1.99
6198--6254
30
1.9
29
92
3
96
12
14
15
57
1.65
6201--6255
15
3.8
14
74
9
56
10
12
16
60
1.60
10127--10344
40
5.5
40
86
7
304
27
27
23
21
1.99
10127--10338
76
2.7
78
86
7
288
27
27
22
22
1.99
12358--12533
46
3.8
46
77
14
191
21
20
29
28
1.98
12354--12526
93
1.9
93
93
0
301
20
21
30
27
1.98
17846--17893
14
3.4
14
80
11
53
72
6
4
16
1.20
18148--18180
16
2.0
17
88
5
50
48
18
6
27
1.71
20841--20991
28
5.4
28
91
1
214
25
11
28
34
1.90
28769--28919
28
5.4
28
92
1
223
25
11
28
33
1.92

Tables:   1

The End!