Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3362
Parameters: 2 7 7 80 10 50 1000
Length:  52837

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1051--1265
39
5.5
39
93
3
328
23
22
28
25
1.99
1051--1265
118
1.8
118
88
7
330
23
22
28
25
1.99
9050--9262
40
5.4
40
90
3
317
24
22
27
26
2.00
9050--9262
79
2.7
80
87
8
303
24
22
27
26
2.00
11497--11673
40
4.4
40
83
6
209
24
22
26
26
2.00
13126--13150
12
2.1
12
100
0
50
36
8
24
32
1.84
17141--17285
43
3.4
42
78
6
141
35
20
20
24
1.95
24070--24769
49
14.6
49
93
3
1108
28
29
8
33
1.86
24070--24769
96
7.3
96
93
2
1146
28
29
8
33
1.86
24288--24363
22
3.3
22
66
16
64
26
30
10
32
1.90
27817--28078
40
6.6
40
92
1
411
25
22
25
25
2.00
32728--32765
19
2.0
19
85
10
51
31
0
18
50
1.47
34871--34910
21
1.9
21
85
10
55
30
12
17
40
1.86
35023--35153
47
2.8
48
86
1
174
22
17
29
31
1.96

Tables:   1

The End!