Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2227
Parameters: 2 7 7 80 10 50 1000
Length:  32580

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1359--1539
80
2.3
80
83
9
219
27
27
20
23
1.99
1356--1539
40
4.6
40
81
7
196
28
27
20
23
1.99
9142--9248
40
2.7
40
84
5
119
25
27
20
27
1.99
9148--9368
80
2.8
80
79
7
193
27
27
20
25
1.99
9188--9368
80
2.3
80
83
9
219
27
27
20
23
1.99
9185--9368
40
4.6
40
81
7
196
28
27
20
23
1.99
14905--15085
40
4.6
40
87
2
249
27
25
22
24
2.00
24619--24664
21
2.3
20
78
14
51
45
17
6
30
1.73
25506--25541
12
3.0
12
95
0
63
52
0
0
47
1.00
25487--25552
22
3.0
22
76
6
62
56
1
1
40
1.18

Tables:   1

The End!