Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2168
Parameters: 2 7 7 80 10 50 1000
Length:  21249

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1840--1892
26
2.0
26
96
0
97
15
22
33
28
1.94
1764--2131
103
3.6
103
92
4
625
18
20
30
30
1.97
2046--2097
27
1.9
27
96
0
95
13
25
32
28
1.93
5807--5914
41
2.5
42
80
8
121
32
17
21
28
1.96
5803--6054
44
5.6
45
71
10
140
29
21
19
29
1.98
5883--6294
142
2.9
143
83
5
507
29
21
18
30
1.97
6125--6393
99
2.7
98
84
3
317
28
21
18
30
1.97
6018--6491
241
2.0
242
86
3
670
29
21
17
31
1.96
6338--6439
44
2.3
44
79
1
105
28
19
23
28
1.98
6259--6759
143
3.5
143
82
3
620
28
21
18
31
1.97
7617--7694
6
13.0
6
78
5
77
3
20
1
74
1.05
7617--7694
12
6.5
12
80
11
88
3
20
1
74
1.05
11762--11907
40
3.7
40
84
7
181
23
22
27
26
2.00
11762--11940
80
2.2
80
81
6
195
25
21
26
25
2.00
19650--19873
79
2.8
79
87
5
301
24
21
27
25
1.99
19650--19873
40
5.7
40
86
6
296
24
21
27
25
1.99
19650--19906
79
3.3
79
83
6
254
25
21
27
25
1.99

Tables:   1

The End!