Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1453
Parameters: 2 7 7 80 10 50 1000
Length:  29475

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7442--7488
20
2.3
20
85
0
67
29
36
12
21
1.91
8974--8999
12
2.2
12
100
0
52
76
7
0
15
0.99
9002--9049
14
3.7
13
76
18
55
75
6
12
6
1.19
8992--9067
25
2.8
25
86
13
91
72
5
13
9
1.26
10084--10189
48
2.2
47
85
9
135
59
1
24
14
1.45
11860--11906
20
2.3
20
85
0
67
29
36
12
21
1.91
17291--17331
17
2.4
18
80
8
50
14
24
4
56
1.58
17262--17315
24
2.2
25
78
15
60
11
22
3
62
1.43
19567--19628
16
3.9
16
81
8
65
16
8
4
70
1.28
19570--19616
17
2.7
17
90
9
69
17
6
4
72
1.22
19604--19628
13
1.9
13
100
0
50
16
8
0
76
1.02
24092--24188
30
3.2
30
68
8
81
27
28
14
28
1.95
29353--29401
8
5.6
8
80
17
53
12
4
2
81
0.91

Tables:   1

The End!