Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1961
Parameters: 2 7 7 80 10 50 1000
Length:  25929

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3575--3618
22
2.0
22
95
0
79
25
36
4
34
1.76
6157--6210
17
3.2
17
81
0
63
75
3
12
7
1.14
9004--9062
20
3.0
21
85
11
72
35
13
27
23
1.92
9023--9062
9
4.2
9
84
12
53
35
15
27
22
1.94
12342--12385
22
2.0
22
95
0
79
25
36
4
34
1.76
16924--16980
11
4.7
11
80
19
69
75
7
0
17
1.02
16924--16982
13
4.6
13
83
8
77
76
6
0
16
1.00
16924--16982
14
4.5
14
85
6
72
76
6
0
16
1.00
17023--17047
13
1.9
13
100
0
50
84
0
16
0
0.63
17027--17096
29
2.4
30
85
9
99
74
1
12
11
1.14
17993--18031
15
2.4
15
87
12
51
66
5
20
7
1.36
23003--23036
15
2.3
15
89
0
50
76
2
20
0
0.92

Tables:   1

The End!