Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3672
Parameters: 2 7 7 80 10 50 1000
Length:  38092

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7066--7102
15
2.5
15
90
0
56
75
0
21
2
0.92
14038--14063
13
2.0
13
100
0
52
46
7
0
46
1.31
14452--14490
20
1.9
21
89
5
62
35
12
28
23
1.91
15743--15796
18
3.2
17
73
21
51
12
25
1
59
1.44
15765--15816
18
2.9
18
80
8
61
15
19
5
59
1.56
15821--15918
6
16.0
6
71
10
65
5
20
2
72
1.14
16866--16914
19
2.6
18
78
9
62
16
4
2
77
1.01
16866--16916
10
5.3
10
79
9
61
17
3
1
76
1.03
18018--18043
13
2.0
13
100
0
52
46
7
0
46
1.31
18433--18471
20
1.9
21
89
5
62
35
12
28
23
1.91
19259--19324
21
3.0
22
84
8
73
30
6
30
33
1.82
21434--21486
23
2.4
22
76
20
56
9
18
1
69
1.25
33082--33116
18
1.9
18
88
11
54
22
20
0
57
1.41
33149--33186
18
2.1
18
90
0
58
2
7
7
81
0.96
33160--33190
11
2.7
12
90
10
55
0
9
6
83
0.79
34202--34254
10
5.0
10
79
9
52
9
5
7
77
1.12
34226--34276
12
4.2
12
87
12
61
13
5
7
72
1.26
34241--34285
15
3.2
15
90
9
69
13
13
6
66
1.43
34349--34377
10
2.7
11
94
5
51
6
3
6
82
0.93
35626--35686
10
6.1
10
74
12
54
32
13
24
29
1.93
35627--35687
20
3.0
20
83
9
79
32
13
26
27
1.93

Tables:   1

The End!