Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1077
Parameters: 2 7 7 80 10 50 1000
Length:  46500

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12091--12934
73
11.2
73
76
12
670
30
15
20
34
1.93
12190--12935
231
3.3
230
89
5
1054
29
15
21
33
1.94
12190--12849
231
2.8
232
92
2
1067
30
15
21
32
1.94
12927--12955
14
2.0
15
93
6
51
13
31
6
48
1.69
14864--14898
13
2.8
13
86
4
54
28
5
2
62
1.32
24521--24573
26
2.0
26
82
7
63
39
20
13
26
1.89
25756--25814
30
2.0
29
86
3
73
45
3
6
44
1.47
29146--29192
24
2.0
23
88
12
69
2
10
14
72
1.21
35432--35456
2
12.5
2
100
0
50
52
0
0
48
1.00
36246--36292
19
2.5
19
80
13
53
74
6
4
14
1.17
36732--36765
14
2.5
14
85
4
52
70
0
0
29
0.87
38273--38610
87
3.9
86
73
8
272
27
23
19
29
1.98
38274--38526
130
2.0
128
81
7
298
27
24
19
28
1.98
38278--38713
44
10.1
44
71
11
156
26
23
19
30
1.98
38413--38693
87
3.3
84
72
14
245
27
20
19
32
1.97
38312--38694
174
2.2
170
88
4
556
26
22
19
31
1.98
38278--38608
41
7.7
41
72
14
184
27
22
19
29
1.98
38654--38953
86
3.5
85
80
7
266
23
22
22
31
1.99
38727--38862
43
3.2
43
64
21
104
22
19
25
32
1.98
38726--38964
86
2.8
88
82
6
281
23
21
23
31
1.98
40203--40231
1
29.0
1
100
0
58
0
0
0
100
0.00

Tables:   1

The End!