Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3039
Parameters: 2 7 7 80 10 50 1000
Length:  52439

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
863--892
12
2.5
12
94
0
51
23
40
30
6
1.80
995--1036
21
2.0
20
86
4
57
30
0
16
52
1.44
16195--16259
33
1.9
34
81
12
80
36
1
3
58
1.23
19306--19382
23
3.2
24
81
3
93
41
20
23
14
1.89
22044--22069
3
8.7
3
100
0
52
69
0
0
30
0.89
23472--23509
20
2.0
20
89
5
60
44
5
15
34
1.69
24103--24152
25
2.0
25
100
0
100
36
12
12
40
1.79
25780--25806
13
2.1
13
100
0
54
22
22
14
40
1.90
26229--26315
40
2.2
40
100
0
174
37
13
22
25
1.91
33029--33054
13
2.0
13
100
0
52
23
23
15
38
1.92
33276--33300
13
1.9
13
100
0
50
8
32
40
20
1.81
37748--37847
51
2.0
51
82
4
121
30
25
19
26
1.98

Tables:   1

The End!