Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3682
Parameters: 2 7 7 80 10 50 1000
Length:  33324

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
790--1204
48
8.9
48
93
4
679
36
6
25
31
1.80
790--1204
95
4.4
96
93
3
706
36
6
25
31
1.80
1353--1454
37
2.8
37
93
1
170
23
20
32
23
1.98
6615--6786
44
3.8
44
78
11
170
29
28
19
22
1.98
6615--6781
45
3.7
44
78
12
189
29
28
19
22
1.98
6620--6786
91
1.8
90
93
3
291
29
29
19
21
1.98
13668--13793
46
2.7
46
91
2
182
30
26
21
21
1.98
18694--18718
13
1.9
13
100
0
50
16
32
16
36
1.90
20802--20845
22
2.0
22
95
0
79
34
4
36
25
1.76
24700--24748
24
2.0
25
84
4
64
79
2
14
4
0.97
24684--24738
16
3.4
16
74
18
51
78
5
12
3
1.06
27524--27570
20
2.3
20
81
0
58
29
34
12
23
1.92
31309--31347
12
3.0
12
88
11
51
15
12
2
69
1.30
31645--31688
22
2.0
22
95
0
79
34
4
36
25
1.76

Tables:   1

The End!