Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3211
Parameters: 2 7 7 80 10 50 1000
Length:  35097

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1543--1639
30
3.2
30
70
8
90
27
26
15
29
1.96
3333--3375
10
3.8
11
80
17
52
86
2
2
9
0.76
3312--3379
23
3.0
22
80
4
73
77
4
8
8
1.10
3333--3379
23
2.0
23
91
0
76
82
4
4
8
0.91
4271--4341
37
1.9
37
86
11
101
76
2
18
2
1.04
4281--4330
6
8.2
6
83
14
50
76
2
20
2
0.99
4391--4421
12
2.6
12
100
0
62
45
12
16
25
1.83
6566--6662
30
3.2
30
75
2
106
27
26
16
28
1.97
15450--15496
25
1.9
25
86
4
69
8
19
2
70
1.24
15462--15514
20
2.7
20
73
26
58
3
18
3
73
1.14
15462--15516
18
2.8
19
74
20
51
3
21
3
70
1.18
17711--17743
13
2.5
13
95
0
57
6
3
6
84
0.84
29479--29561
1
83.0
1
75
0
76
1
3
7
87
0.69
29478--29564
30
2.9
30
84
6
113
2
3
8
86
0.77
29847--29894
17
3.0
15
77
14
51
12
0
10
77
1.00
29847--29894
16
2.9
17
75
15
55
12
0
10
77
1.00

Tables:   1

The End!