Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1615
Parameters: 2 7 7 80 10 50 1000
Length:  40333

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1614--2692
42
25.8
42
74
9
733
18
33
32
16
1.93
1617--2646
85
12.3
84
79
7
793
18
33
32
15
1.92
1620--2393
252
3.1
251
86
4
1001
17
33
32
16
1.92
2774--2804
14
2.2
14
100
0
62
32
45
16
6
1.72
7385--7416
14
2.3
14
100
0
64
31
46
15
6
1.71
7967--8045
24
3.3
24
85
5
106
20
35
37
6
1.78
8252--8542
42
6.9
42
79
8
299
19
33
28
18
1.95
8252--8542
83
3.5
82
78
11
288
19
33
28
18
1.95
13381--14188
85
9.5
85
85
4
741
17
34
32
16
1.92
13417--14236
126
6.4
127
82
6
835
17
33
31
16
1.93
13417--14188
43
18.2
43
85
4
887
17
33
32
16
1.92
14919--15028
58
1.9
58
90
0
175
25
19
22
32
1.97
15077--15127
24
2.1
24
88
0
75
17
27
41
13
1.87
20384--20442
22
2.7
21
80
12
73
32
3
20
44
1.68
25528--25586
22
2.7
21
80
12
73
32
3
20
44
1.68
32302--36164
43
92.2
43
79
9
3388
17
33
33
16
1.92
32265--36024
85
45.0
85
78
9
2242
17
33
32
16
1.92
32302--36164
126
30.7
127
78
9
3252
17
33
33
16
1.92
35636--35755
37
3.3
36
76
19
108
17
34
35
13
1.89

Tables:   1

The End!