Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold402
Parameters: 2 7 7 80 10 50 1000
Length:  38330

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
64--610
117
4.6
118
84
9
668
25
21
27
26
1.99
64--610
236
2.3
237
85
6
745
25
21
27
26
1.99
64--612
39
13.9
40
81
8
592
25
20
27
26
1.99
3117--3192
22
3.3
22
70
20
73
47
14
6
31
1.70
3107--3204
48
2.0
48
100
0
196
45
14
6
33
1.69
3111--3185
23
3.2
23
68
20
73
48
13
8
30
1.71
3108--3185
26
3.2
26
66
26
78
48
12
7
30
1.69
4258--4666
47
8.6
47
89
2
559
34
12
27
25
1.92
4676--4766
46
2.0
46
84
0
119
34
7
31
26
1.85
6258--6293
18
2.0
18
94
0
63
22
5
13
58
1.56
6383--6408
8
3.2
8
100
0
52
23
0
23
53
1.46
6857--6886
15
2.0
15
93
0
51
36
6
26
30
1.82
9053--9275
40
5.6
40
89
2
333
26
27
21
23
1.99
9799--9825
13
2.1
13
100
0
54
51
14
7
25
1.68
16319--16541
40
5.6
40
89
2
315
27
27
21
23
1.99
25641--25695
27
2.0
27
100
0
110
25
10
21
41
1.86
28769--28992
40
5.7
40
85
6
287
25
27
22
24
2.00
30118--30237
56
2.1
56
98
0
231
22
23
9
45
1.81
36664--36915
38
6.6
40
82
11
271
25
28
20
24
1.99
36666--36865
77
2.7
75
85
7
264
26
29
20
24
1.99

Tables:   1

The End!