Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1662
Parameters: 2 7 7 80 10 50 1000
Length:  29510

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1638--1665
12
2.3
12
100
0
56
7
14
32
46
1.71
1847--1992
40
3.7
38
79
9
132
26
23
19
30
1.98
2048--2094
23
2.0
22
84
12
58
31
4
6
57
1.43
2206--2264
7
8.3
7
81
10
75
16
0
32
50
1.46
2216--2332
21
5.5
20
73
11
72
20
0
32
47
1.51
5465--5554
43
2.1
43
95
0
162
34
8
14
42
1.77
7382--7610
85
2.7
84
79
7
239
22
18
27
31
1.97
7382--7611
43
5.4
43
80
4
223
22
18
26
32
1.97
13944--14050
26
4.2
26
93
1
189
35
24
7
32
1.83
20935--21041
26
4.2
26
92
1
180
36
23
7
32
1.83
23387--23420
6
5.7
6
92
0
50
55
0
0
44
0.99
23387--23421
18
1.9
18
94
0
61
57
0
0
42
0.99
27388--27447
12
5.2
12
75
20
56
38
1
0
60
1.07
29061--29107
22
2.2
21
84
3
58
36
21
8
34
1.84
29078--29156
19
4.2
19
90
9
126
35
16
10
37
1.82
29078--29150
36
2.0
38
94
5
132
35
15
10
38
1.82
29079--29166
36
2.4
35
85
14
117
35
15
10
38
1.82

Tables:   1

The End!