Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2358
Parameters: 2 7 7 80 10 50 1000
Length:  48681

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
227--267
21
2.0
20
85
9
55
41
7
24
26
1.81
5637--5809
46
3.7
46
76
10
190
22
20
27
30
1.98
6033--6070
19
2.0
20
85
15
53
36
0
23
39
1.55
7722--7750
5
5.8
5
100
0
58
41
0
0
58
0.98
14016--14048
7
4.9
7
85
7
50
27
3
0
69
1.03
16454--16486
14
2.5
13
90
9
57
15
15
9
60
1.58
18794--18973
40
4.6
40
82
5
197
25
26
22
25
2.00
18794--18973
80
2.3
79
84
1
236
25
26
22
25
2.00
27130--27208
37
2.1
37
90
0
122
25
31
18
24
1.98
27326--27641
47
6.7
46
96
3
528
29
30
8
31
1.88
27326--27641
93
3.3
94
95
4
557
29
30
8
31
1.88
27326--27641
140
2.2
140
94
4
555
29
30
8
31
1.88
31158--31498
40
8.5
40
84
3
384
24
27
22
24
2.00
31802--31879
29
2.7
29
84
7
97
28
32
15
24
1.95
31862--32004
42
3.4
43
96
3
265
26
34
15
23
1.94
33863--33940
36
2.1
37
88
2
113
25
32
17
24
1.97
34057--34372
47
6.7
47
95
2
530
29
30
8
30
1.88
34057--34372
93
3.3
94
94
3
530
29
30
8
30
1.88
34057--34372
140
2.2
142
93
4
532
29
30
8
30
1.88

Tables:   1

The End!