Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1461
Parameters: 2 7 7 80 10 50 1000
Length:  12782

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
554--586
12
2.6
13
85
9
50
9
45
0
45
1.35
1643--1707
28
2.3
28
91
0
103
32
27
9
30
1.88
1812--1901
27
3.2
28
81
7
112
18
24
24
32
1.97
1822--1912
27
3.2
28
81
4
94
20
26
20
31
1.98
1812--1926
55
2.1
56
82
8
137
18
24
22
34
1.96
2972--3005
10
3.3
10
84
8
50
29
8
8
52
1.62
8415--8461
23
2.0
23
100
0
94
25
29
19
25
1.98
8747--8808
29
2.2
29
85
2
81
30
25
9
33
1.88
8914--8994
28
2.9
28
80
9
94
19
25
22
32
1.98
9107--9137
14
2.1
15
94
5
55
12
0
48
38
1.42
12248--12420
45
3.8
45
78
15
185
21
20
29
28
1.98

Tables:   1

The End!