Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3804
Parameters: 2 7 7 80 10 50 1000
Length:  31397

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2197--2249
23
2.4
22
76
20
56
9
18
1
69
1.25
7221--7267
20
2.3
20
85
0
67
21
12
36
29
1.91
8406--8442
18
2.1
18
90
5
58
40
0
10
48
1.38
11771--11831
13
4.6
12
74
20
50
72
3
8
16
1.23
11824--11877
15
3.7
15
69
20
51
72
9
12
5
1.27
11812--11875
28
2.2
28
86
8
85
75
6
14
4
1.17
13682--13728
20
2.3
20
85
0
67
29
36
12
21
1.91
15131--15178
13
3.7
13
76
20
55
75
4
4
16
1.12
16297--16402
48
2.2
47
85
9
135
59
1
24
14
1.45
20541--20577
18
2.1
18
90
5
58
40
0
10
48
1.38
22374--22470
30
3.2
30
73
2
88
29
27
13
28
1.94
23328--23376
20
2.3
20
82
10
53
32
8
14
44
1.74
24109--24140
10
3.1
10
91
8
55
75
9
0
15
1.05
24109--24152
11
3.9
11
91
8
63
72
9
4
13
1.24
24132--24169
18
2.2
17
86
13
51
76
5
7
10
1.15
25169--25239
30
2.4
31
81
11
85
61
1
22
14
1.40
27327--27423
30
3.2
30
70
8
81
28
28
14
27
1.95

Tables:   1

The End!