Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1707
Parameters: 2 7 7 80 10 50 1000
Length:  40755

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4311--4462
70
2.2
69
80
14
177
35
22
6
35
1.80
4132--28576
23
1078.3
22
72
14
12587
36
23
6
32
1.82
5682--5745
26
2.6
25
85
5
85
42
20
4
32
1.73
4132--28576
69
359.4
68
71
13
13936
36
23
6
32
1.82
7697--10587
89
32.4
86
68
16
270
37
23
6
32
1.81
12023--12173
65
2.3
65
79
14
157
37
22
6
33
1.80
15860--22986
228
31.3
228
96
1
4966
36
24
7
32
1.82
4132--24835
229
91.4
229
89
6
12098
36
23
6
32
1.82
16843--28576
228
51.6
228
95
2
4989
36
24
7
32
1.82
30149--30189
21
2.0
21
81
18
50
21
26
19
31
1.97
33557--33859
23
13.2
23
70
13
169
36
21
7
33
1.83
33564--33724
67
2.4
68
80
7
177
36
22
6
33
1.81
36193--36245
21
2.5
21
84
6
63
3
1
7
86
0.75
37095--37245
22
6.5
22
76
11
108
35
7
21
35
1.82
37095--37245
45
3.2
45
79
4
149
35
7
21
35
1.82
37782--37889
24
4.7
23
76
13
98
33
8
21
37
1.83
37095--40645
23
156.5
23
70
15
1434
32
7
23
37
1.82
37085--40752
46
80.9
46
70
14
1614
32
7
23
37
1.82
37330--40413
68
45.5
69
68
16
722
32
7
23
37
1.82
38019--40413
91
26.6
91
69
16
565
32
6
23
37
1.82
40481--40645
48
3.5
47
79
10
144
34
7
22
35
1.83

Tables:   1

The End!