Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1806
Parameters: 2 7 7 80 10 50 1000
Length:  15320

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32--67
15
2.4
15
90
9
56
72
2
0
25
0.98
63--161
30
3.4
29
83
8
112
30
21
4
44
1.70
92--173
28
2.9
28
85
5
103
32
18
2
46
1.62
78--176
28
3.5
27
77
13
92
30
22
2
45
1.63
1466--1514
16
3.0
16
80
16
64
32
14
12
40
1.83
1491--1538
26
2.0
26
88
12
75
22
14
16
45
1.84
1541--1588
8
6.0
8
81
18
64
85
0
0
14
0.60
1541--1588
14
3.0
16
82
17
64
85
0
0
14
0.60
1541--1587
10
4.5
11
80
15
55
87
0
0
12
0.55
1540--1585
24
1.9
24
91
8
76
86
0
0
13
0.56
1650--2081
18
25.0
18
70
15
218
30
13
11
44
1.80
1650--2081
17
25.0
17
71
13
206
30
13
11
44
1.80
14040--14141
52
1.9
53
96
2
188
29
15
18
36
1.92
14156--14257
51
2.0
50
88
5
152
27
11
19
41
1.86
14206--14817
71
8.8
70
91
6
942
29
16
19
34
1.94
14210--14817
141
4.3
139
92
5
964
29
17
19
33
1.94
14212--14817
278
2.2
277
91
5
974
29
17
19
33
1.94
14773--15064
49
5.9
50
79
15
342
27
14
19
39
1.90
14777--15064
97
2.9
99
88
10
409
27
14
19
38
1.91

Tables:   1

The End!