Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Please cite: G. Benson, "Tandem repeats finder: a program to analyze DNA sequences" Nucleic Acid Research(1999) Vol. 27, No. 2, pp. 573-580. Sequence: Scaffold2945 Parameters: 2 7 7 80 10 50 1000 Length: 34580

Tables:   1   

This is table  1  of  1  ( 15 repeats found )
Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1386--1497
41
2.7
42
82
12
133
25
20
26
27
1.99
9950--10134
79
2.3
82
84
7
238
25
27
22
24
2.00
9931--10134
40
5.1
40
82
8
238
25
27
22
25
2.00
12589--12650
27
2.3
27
83
5
72
32
22
12
32
1.92
16428--16480
22
2.5
21
77
14
56
67
3
7
20
1.31
16562--16613
3
17.3
3
100
0
104
67
0
0
32
0.91
19207--19317
33
3.4
33
89
0
168
18
9
33
39
1.82
19222--19344
33
3.7
33
84
5
106
21
9
31
37
1.86
19207--19339
66
2.0
66
82
2
160
19
9
33
38
1.83
24998--25627
47
13.5
47
95
1
1077
31
8
30
28
1.88
25150--25223
22
3.3
22
64
17
62
29
10
31
28
1.91
25746--25824
37
2.1
37
88
4
115
25
18
30
25
1.98
27961--28141
40
4.6
38
82
7
177
25
22
27
25
2.00
27957--28141
79
2.3
81
83
9
229
24
22
27
25
2.00
28010--28174
79
2.1
79
83
6
201
26
20
26
26
1.99

Tables:   1   

The End!