Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold427
Parameters: 2 7 7 80 10 50 1000
Length:  25419

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
540--853
110
2.8
106
77
8
306
40
17
14
28
1.88
485--853
27
13.5
27
79
12
308
39
17
14
28
1.88
12188--12372
47
3.9
47
90
0
280
33
12
28
25
1.92
12579--12722
37
4.0
37
93
3
240
23
18
31
26
1.97
12579--12722
73
2.0
72
91
4
236
23
18
31
26
1.97
12734--12784
25
2.0
25
100
0
102
27
23
23
25
2.00
15919--16096
27
6.6
27
83
3
205
26
15
28
29
1.96
15920--16075
82
1.9
81
88
3
233
26
15
28
29
1.96
15916--16096
82
2.2
81
83
2
229
27
15
27
29
1.96
23961--24129
27
6.3
27
82
4
171
26
14
28
30
1.95
23980--24129
55
2.8
54
83
4
167
27
15
28
28
1.96
23952--24129
82
2.2
80
80
5
200
26
15
27
30
1.96

Tables:   1

The End!