Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold477
Parameters: 2 7 7 80 10 50 1000
Length:  32493

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1244--1297
27
2.0
26
82
3
63
31
22
18
27
1.97
8682--8735
27
2.0
26
82
3
63
29
22
20
27
1.98
12352--12391
19
2.1
19
85
0
53
40
12
10
37
1.77
15516--15552
16
2.3
16
95
0
65
64
0
29
5
1.15
18102--18181
27
3.0
26
76
10
81
35
17
17
30
1.93
18166--18462
27
11.1
27
77
7
171
39
20
9
30
1.84
18226--18427
54
3.7
54
82
2
210
38
21
10
29
1.87
18166--18463
54
5.5
53
77
5
199
39
20
9
30
1.84
18166--18450
81
3.5
79
75
7
218
39
21
9
30
1.85
18166--18513
27
12.9
27
73
9
144
39
19
10
30
1.84
18773--18895
41
3.0
41
87
0
174
20
21
30
27
1.98
22878--23083
40
5.2
40
81
9
235
25
20
28
25
1.99
31025--31230
39
5.2
39
83
5
245
25
20
28
25
1.99

Tables:   1

The End!