Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2462
Parameters: 2 7 7 80 10 50 1000
Length:  42367

Tables:   1   

This is table  1  of  1  ( 32 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2703--2737
17
2.1
17
100
0
70
28
22
22
25
1.99
5587--5734
72
2.1
67
86
6
197
31
27
16
23
1.96
5747--5795
25
2.0
25
95
0
89
30
32
24
12
1.92
5653--5872
101
2.1
103
90
4
347
32
30
18
18
1.95
12663--12698
17
2.1
18
89
5
56
19
8
8
63
1.47
16064--16138
6
12.7
6
74
5
64
48
2
14
34
1.58
16410--16450
17
2.5
17
88
4
57
58
2
14
24
1.49
16732--16798
25
2.8
24
86
8
84
61
4
8
25
1.45
16727--16987
131
2.0
131
85
3
355
59
4
11
24
1.51
16862--17208
114
3.2
112
79
11
348
57
4
13
24
1.57
17088--17121
17
2.0
17
94
0
59
55
5
8
29
1.54
17188--17258
17
4.2
16
73
10
54
60
4
12
22
1.49
17034--17261
105
2.2
105
80
6
264
58
3
13
24
1.51
17228--17257
11
2.7
11
94
0
51
60
3
13
23
1.48
17181--17255
38
2.0
38
82
10
91
60
4
12
24
1.49
17193--17263
27
2.6
27
72
18
74
60
4
11
23
1.48
17552--17591
20
2.0
20
90
0
62
22
40
10
27
1.86
19817--20053
89
2.8
83
79
10
253
56
11
5
27
1.55
22030--22091
5
12.4
5
100
0
124
40
0
0
59
0.97
22876--22925
15
3.3
15
78
10
66
38
2
10
50
1.48
24222--24265
24
1.9
22
81
9
52
47
6
20
25
1.74
25093--25313
68
3.3
66
86
5
295
48
16
7
27
1.72
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
26982--27029
15
3.2
15
75
0
51
35
29
8
27
1.86
27504--27702
6
33.7
6
71
7
68
59
12
9
19
1.59
27510--27539
15
2.0
15
93
0
51
63
20
0
16
1.31
27530--27724
12
16.8
12
73
12
122
57
10
10
20
1.62
27530--27724
18
11.2
18
76
9
129
57
10
10
20
1.62
28299--28341
22
2.0
22
90
0
68
48
11
11
27
1.74
29668--29705
20
1.9
19
85
15
51
28
10
2
57
1.45
41818--42154
43
7.7
43
67
13
168
29
21
23
25
1.99
41675--42163
133
3.7
133
93
2
813
29
21
22
26
1.99
41675--42178
265
1.9
266
91
2
825
28
21
23
26
1.99

Tables:   1

The End!