Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2111
Parameters: 2 7 7 80 10 50 1000
Length:  26307

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2123--2223
38
2.6
39
78
10
127
24
30
22
21
1.99
2644--2723
29
2.7
30
86
3
108
27
32
15
25
1.95
4495--4572
36
2.1
37
88
2
113
25
30
19
24
1.98
4691--5201
49
11.1
47
79
14
448
28
29
9
32
1.88
4693--5198
96
5.5
96
73
17
426
28
30
9
32
1.88
4937--4999
33
1.9
33
96
0
117
30
28
6
34
1.82
4886--5046
80
2.0
80
98
0
313
29
29
8
32
1.87
4981--5201
47
4.7
42
96
2
217
28
29
9
31
1.89
4837--5093
127
2.0
128
95
1
462
29
29
8
32
1.87
4969--5201
96
2.5
94
97
1
430
29
29
9
32
1.88
12776--12852
26
2.9
26
77
11
84
33
18
9
38
1.82
19948--19998
26
2.0
26
96
0
93
11
23
35
29
1.90
19870--20092
103
2.2
104
92
2
369
17
18
31
31
1.95
20011--20162
71
2.1
72
92
1
252
23
17
29
30
1.97

Tables:   1

The End!