Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1428
Parameters: 2 7 7 80 10 50 1000
Length:  26262

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3224--3416
40
4.8
40
90
1
271
23
20
29
25
1.99
8267--8454
40
4.7
40
91
0
304
25
22
28
23
2.00
13153--13233
23
3.6
22
81
5
90
37
18
19
24
1.94
13170--13259
23
4.0
23
74
5
76
34
21
21
23
1.97
13170--13259
46
2.0
45
89
6
137
34
21
21
23
1.97
17490--17713
104
2.2
104
93
1
378
31
31
19
17
1.95
18042--18105
30
2.2
29
81
10
76
29
28
6
35
1.82
18049--18105
30
1.9
30
85
3
80
29
24
7
38
1.82
24973--25123
71
2.1
71
91
2
241
30
29
17
23
1.97
25043--25263
103
2.2
103
90
4
358
31
30
19
18
1.95
24973--25159
71
2.6
70
86
7
223
31
30
17
20
1.96
25590--25653
30
2.2
29
81
10
76
29
28
6
35
1.82
25597--25653
30
1.9
30
85
3
80
29
24
7
38
1.82

Tables:   1

The End!