Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold964
Parameters: 2 7 7 80 10 50 1000
Length:  34693

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5551--5604
24
2.2
25
78
15
60
11
22
3
62
1.43
7856--7883
14
2.0
14
100
0
56
14
7
7
71
1.29
7861--7907
23
2.0
23
87
4
67
6
8
6
78
1.08
7862--7907
13
3.8
12
83
16
51
6
8
6
78
1.10
11181--11286
48
2.2
48
85
9
137
14
23
2
59
1.48
11255--11346
39
2.5
36
70
16
82
18
28
4
48
1.67
12401--12465
29
2.2
28
82
12
78
4
15
4
75
1.13
12457--12519
12
4.8
13
76
16
58
15
4
6
73
1.21
13993--14039
20
2.3
20
85
0
67
21
12
36
29
1.91
14935--14984
21
2.5
20
80
6
64
20
22
20
38
1.94
16692--16731
11
3.6
11
89
0
62
70
7
7
15
1.33
16692--16737
22
2.1
22
91
0
74
67
6
8
17
1.39
19523--19575
23
2.4
22
76
20
56
9
18
1
69
1.25
19532--19626
21
4.7
21
70
21
60
10
24
1
64
1.32
20741--20837
30
3.2
30
75
2
106
28
26
15
28
1.96
22561--22616
11
5.1
11
79
18
55
73
7
10
8
1.26
23519--23589
37
1.9
37
86
11
101
76
2
18
2
1.04
23529--23578
6
8.2
6
83
14
50
76
2
20
2
0.99
25795--25891
30
3.2
30
75
2
106
27
26
16
28
1.97
27624--27679
13
4.3
13
70
17
53
75
1
14
8
1.13
27599--27679
39
2.1
39
84
4
103
77
2
11
8
1.07
28545--28615
37
1.9
37
86
11
101
76
2
18
2
1.04
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
28555--28604
6
8.2
6
83
14
50
76
2
20
2
0.99
30819--30915
30
3.2
30
75
2
106
27
26
16
28
1.97

Tables:   1

The End!