Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2135
Parameters: 2 7 7 80 10 50 1000
Length:  31307

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2192--2243
26
2.0
25
92
3
86
26
34
23
15
1.94
2170--2521
99
3.5
100
85
11
445
31
30
17
20
1.96
5540--5597
26
2.2
26
79
14
66
32
10
13
43
1.78
9320--9370
22
2.4
21
75
21
52
9
19
1
68
1.27
12277--12324
18
2.7
18
86
0
69
14
27
0
58
1.37
12252--12332
24
3.4
23
77
1
90
12
27
0
60
1.32
12329--12423
41
2.3
41
90
1
147
14
24
5
55
1.60
12336--12401
20
3.2
20
65
12
53
12
22
7
57
1.60
14620--14644
13
1.9
13
100
0
50
16
32
16
36
1.90
17585--17636
23
2.3
22
75
21
54
9
23
1
65
1.32
23338--23384
20
2.3
20
81
0
58
23
12
34
29
1.92
25206--25252
20
2.3
20
85
0
67
21
12
36
29
1.91
29566--29612
20
2.3
20
85
0
67
21
12
36
29
1.91
30916--30959
22
2.0
22
90
0
70
27
36
4
31
1.77

Tables:   1

The End!