Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2653
Parameters: 2 7 7 80 10 50 1000
Length:  30102

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6261--6530
47
5.7
47
93
0
425
32
8
30
28
1.87
6649--6726
36
2.1
37
90
2
122
24
19
30
25
1.98
8589--8691
43
2.4
43
100
0
206
22
15
35
26
1.94
8673--8745
28
2.6
29
84
8
96
26
15
32
26
1.95
9094--9277
40
4.6
39
87
5
235
25
21
27
26
1.99
9069--9277
80
2.6
80
84
5
257
24
22
27
25
2.00
12613--12976
47
7.7
47
90
3
545
32
9
29
28
1.89
12613--12976
186
1.9
189
88
3
556
32
9
29
28
1.89
13098--13173
37
2.1
37
89
0
116
22
19
31
26
1.98
23329--23512
40
4.6
39
87
6
237
26
27
21
24
1.99
23329--23512
79
2.3
82
86
5
254
26
27
21
24
1.99
29945--30088
27
5.3
27
83
3
137
29
28
13
28
1.94
29945--30088
55
2.7
55
82
4
150
29
28
13
28
1.94

Tables:   1

The End!