Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2449
Parameters: 2 7 7 80 10 50 1000
Length:  18354

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4432--4485
27
2.0
26
85
3
72
38
20
18
22
1.93
4450--4506
27
2.1
27
83
6
71
36
19
21
22
1.95
4486--4763
27
10.4
27
78
4
269
26
20
17
35
1.94
4486--4763
54
5.2
54
80
5
296
26
20
17
35
1.94
4577--4722
76
1.9
76
88
0
220
25
20
17
36
1.94
4551--4765
103
2.1
105
87
5
312
27
20
16
35
1.94
6466--6634
39
4.3
40
89
2
225
26
28
21
24
1.99
6464--6634
79
2.2
79
84
2
227
26
28
21
23
1.99
6466--6687
39
5.6
39
84
6
216
26
27
21
24
1.99
6464--6687
79
2.8
79
82
4
218
26
28
20
24
1.99
6619--6696
40
1.9
41
82
10
97
26
28
21
23
1.99
14247--14418
39
4.3
40
88
4
231
27
27
20
23
1.99

Tables:   1

The End!