Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold330
Parameters: 2 7 7 80 10 50 1000
Length:  39418

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6802--7024
40
5.7
39
85
8
267
24
22
27
25
2.00
10114--10228
6
18.7
6
71
18
67
49
13
16
20
1.79
10123--10257
31
4.5
31
81
12
131
50
13
16
20
1.78
10159--10254
25
3.6
25
81
8
102
51
15
14
18
1.77
10394--10513
27
4.5
26
80
8
118
35
19
25
20
1.96
10622--10686
22
3.0
22
80
8
78
33
23
23
20
1.97
11128--11626
27
18.6
27
85
4
641
24
21
21
33
1.97
11611--11709
27
3.7
27
67
5
65
32
8
21
38
1.82
11671--11951
108
2.6
108
85
2
332
32
8
19
40
1.81
11666--11951
27
10.6
26
78
5
221
31
8
19
39
1.82
11666--11951
81
3.5
80
80
3
295
31
8
19
39
1.82
11691--11951
54
4.8
54
85
0
290
32
8
19
39
1.81
12790--12907
29
4.1
30
79
8
131
27
28
14
29
1.95
12791--12903
58
2.0
57
84
5
147
25
30
15
29
1.95
12976--13012
19
2.0
18
89
5
56
18
35
16
29
1.93
18484--18517
15
2.3
15
100
0
68
67
5
14
11
1.39
18854--18893
12
3.3
12
89
0
62
80
0
7
12
0.91
18849--18893
6
7.5
6
82
0
54
77
0
8
13
0.98
25966--26043
27
2.9
27
92
0
129
26
23
16
33
1.96
25974--26060
27
3.2
26
79
12
95
25
22
18
33
1.97
27635--27676
21
2.0
21
100
0
84
28
4
19
47
1.69
28659--28813
43
3.6
43
80
5
170
27
15
23
33
1.95

Tables:   1

The End!