Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold585
Parameters: 2 7 7 80 10 50 1000
Length:  39792

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5430--5470
20
2.2
19
86
8
57
46
7
0
46
1.30
3281--11883
513
16.8
513
92
2
13881
35
13
14
36
1.86
10057--10099
19
2.2
19
84
12
52
41
6
2
48
1.43
17898--18026
47
2.8
47
86
1
152
23
16
27
33
1.95
22247--22489
129
1.9
129
85
0
333
40
15
14
29
1.87
22244--22528
43
6.6
43
84
0
300
41
16
14
28
1.87
22337--22606
86
3.1
86
79
4
204
40
15
17
26
1.89
22279--22561
129
2.2
129
79
0
305
40
16
15
27
1.89
22392--22618
43
5.3
42
80
1
166
41
15
16
25
1.88
22667--22701
18
1.9
18
94
0
61
31
25
0
42
1.55
24862--24918
27
2.1
27
100
0
114
42
28
7
22
1.80
26527--26573
22
2.2
21
84
3
58
36
21
8
34
1.84
26544--26622
19
4.2
19
90
9
126
35
16
10
37
1.82
26544--26616
36
2.0
38
94
5
132
35
15
10
38
1.82
26545--26632
36
2.4
35
85
14
117
35
15
10
38
1.82
27363--28058
84
8.3
84
89
3
1046
25
21
22
30
1.99
29007--29079
20
3.5
20
76
14
67
5
15
0
79
0.90
29007--29047
12
3.2
12
86
10
55
7
12
0
80
0.90
29020--29079
20
3.1
19
85
7
77
3
16
0
80
0.85
29021--29076
29
1.9
29
85
0
76
3
17
0
78
0.89

Tables:   1

The End!