Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3371
Parameters: 2 7 7 80 10 50 1000
Length:  27893

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6405--6452
25
2.0
24
87
4
69
50
10
14
25
1.74
9266--9326
10
6.1
10
74
12
54
32
13
24
29
1.93
9267--9327
20
3.0
20
83
9
79
32
13
26
27
1.93
11394--11427
18
1.9
18
88
5
52
23
20
0
55
1.43
11465--11518
6
9.2
6
75
4
56
3
14
5
75
1.12
14003--14173
28
6.1
28
97
0
308
35
28
11
25
1.90
14003--14326
71
4.2
83
89
9
417
35
28
10
25
1.89
14159--14188
15
2.0
15
100
0
60
46
26
6
20
1.75
14131--14216
43
2.0
43
100
0
172
39
27
9
23
1.85
14174--14244
28
2.5
28
100
0
142
38
28
9
23
1.87
14103--14315
71
3.0
71
100
0
426
38
28
9
23
1.87
14202--14287
43
2.0
43
100
0
172
39
27
9
23
1.85
14230--14259
15
2.0
15
100
0
60
46
26
6
20
1.75
14047--14326
99
2.8
100
81
13
414
36
28
10
24
1.88
14245--14326
28
2.9
28
100
0
164
35
28
10
25
1.90
22333--22457
28
4.5
28
96
2
227
33
29
12
24
1.91
24289--24331
21
1.9
23
86
13
63
11
4
9
74
1.20

Tables:   1

The End!