Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2012
Parameters: 2 7 7 80 10 50 1000
Length:  27116

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
279--303
13
1.9
13
100
0
50
40
24
4
32
1.73
4234--4415
76
2.3
80
83
9
223
24
22
28
25
2.00
4235--4415
40
4.6
39
84
9
210
24
22
28
24
2.00
4287--4448
80
2.1
75
84
7
200
25
20
27
25
1.99
14774--14956
77
2.3
81
84
8
243
24
22
27
25
2.00
14774--14956
40
4.7
40
85
9
234
24
22
27
25
2.00
14827--14989
77
2.1
76
85
6
211
25
20
27
25
1.99
25296--25520
40
5.7
40
87
6
194
25
21
26
26
1.99
25300--25527
80
2.9
79
82
10
284
26
20
26
25
1.99
25348--25553
40
5.2
40
83
8
226
27
19
25
26
1.99

Tables:   1

The End!