Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2680
Parameters: 2 7 7 80 10 50 1000
Length:  42296

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
801--971
56
3.1
56
90
5
283
46
8
22
23
1.78
807--977
55
3.1
55
90
4
272
47
8
20
23
1.76
2092--2274
79
2.3
81
84
7
232
24
22
27
25
2.00
2093--2276
40
4.6
40
83
9
216
23
22
28
25
2.00
2145--2309
79
2.1
79
84
6
210
25
21
27
25
1.99
8898--9079
40
4.6
40
89
2
260
27
23
26
22
1.99
19805--19948
40
3.5
40
84
6
191
25
26
24
24
2.00
33022--33169
40
3.7
40
83
5
210
25
20
28
26
1.99
33022--33202
40
4.6
41
81
8
205
26
20
27
25
1.99
33029--33202
79
2.2
79
83
6
210
25
20
28
25
1.99
41043--41194
82
1.9
82
85
10
213
25
22
26
25
2.00
41043--41194
42
3.7
40
84
11
202
25
22
26
25
2.00
41043--41217
42
4.3
40
83
11
198
26
22
26
24
2.00

Tables:   1

The End!