Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold678
Parameters: 2 7 7 80 10 50 1000
Length:  47977

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5941--6117
39
4.5
39
83
7
180
25
20
28
25
1.99
5935--6115
79
2.3
77
81
8
195
25
21
28
24
1.99
16246--16461
40
5.5
40
86
4
280
23
26
24
25
2.00
23018--23232
40
5.5
40
85
5
262
24
27
22
25
2.00
27718--27832
55
2.1
56
83
8
146
34
21
24
19
1.96
27743--27832
27
3.2
27
85
7
119
32
23
24
20
1.98
27938--28030
28
3.3
28
92
3
152
29
8
27
34
1.87
36436--36467
13
2.5
13
100
0
64
31
37
21
9
1.85

Tables:   1

The End!