Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3385
Parameters: 2 7 7 80 10 50 1000
Length:  44352

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
783--810
5
5.6
5
100
0
56
82
0
0
17
0.68
4114--4145
5
6.6
5
92
7
57
81
0
0
18
0.70
4115--4145
9
3.3
9
95
4
53
80
0
0
19
0.71
12186--12232
13
3.6
13
91
0
76
10
23
42
23
1.85
12898--12931
17
2.1
17
94
5
61
76
0
5
17
0.98
14541--14595
3
18.3
3
92
0
92
1
29
0
69
0.99
23215--23249
17
2.0
18
88
5
54
60
8
11
20
1.57
23560--23585
7
3.7
7
100
0
52
57
0
0
42
0.98
23629--23683
25
2.2
24
83
3
65
63
1
7
27
1.31
23838--23884
18
2.7
18
83
3
60
63
6
0
29
1.19
25509--25842
83
4.0
83
92
1
528
29
18
17
33
1.95
25782--26373
119
5.0
119
93
0
961
30
19
17
33
1.94
37738--37772
17
2.0
18
88
5
54
60
8
11
20
1.57
38222--38268
16
2.9
16
78
15
60
57
0
4
38
1.18
38249--38287
21
1.9
19
85
10
51
66
0
2
30
1.05
38223--38288
29
2.3
28
79
7
69
60
0
4
34
1.17
41412--41493
15
5.4
15
72
18
62
29
3
2
64
1.23
41437--41493
15
3.6
17
84
13
77
28
3
0
68
1.06
41453--41543
12
6.9
13
72
20
57
31
1
2
64
1.12
41439--41558
17
6.8
17
71
16
52
30
2
1
65
1.16
41437--41530
47
2.0
47
85
4
127
31
2
1
64
1.12
41575--41626
22
2.4
22
78
15
63
34
9
0
55
1.32
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
41736--41776
16
2.6
16
82
17
59
24
0
7
68
1.15

Tables:   1

The End!