Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1970
Parameters: 2 7 7 80 10 50 1000
Length:  47583

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1302--1448
40
3.7
40
83
5
120
25
27
21
25
2.00
1348--1528
80
2.3
80
83
9
219
27
27
20
23
1.99
1345--1528
40
4.6
40
81
7
196
28
27
20
23
1.99
9114--9260
40
3.7
40
83
5
120
25
27
21
25
2.00
9160--9340
80
2.3
80
83
9
219
27
27
20
23
1.99
9157--9340
40
4.6
40
81
7
196
28
27
20
23
1.99
12081--12255
46
3.7
46
79
6
183
30
21
26
22
1.99
14413--14524
42
2.7
42
78
0
125
30
25
16
28
1.96
18195--18377
79
2.3
81
83
7
232
25
27
22
24
2.00
18176--18377
40
5.1
40
81
8
234
25
26
22
25
2.00
23802--23990
39
4.8
40
85
8
169
25
21
26
25
2.00
23802--24023
78
2.8
79
82
9
269
25
22
26
26
2.00
23802--24023
40
5.6
39
84
9
249
25
22
26
26
2.00
23815--24055
78
3.1
77
80
9
249
27
20
25
26
1.99
29536--29737
40
5.1
40
81
9
229
25
28
21
24
1.99
32079--32230
82
1.9
81
81
8
184
35
7
17
38
1.79
32557--32595
20
2.0
20
84
0
51
33
2
33
30
1.72
39453--39677
40
5.6
39
88
6
267
25
26
21
26
2.00
39453--39677
79
2.8
79
83
9
278
25
26
21
26
2.00
39453--39673
119
1.9
120
83
8
290
25
26
21
26
1.99
43411--43540
40
3.3
41
84
9
121
27
20
26
25
1.99
43437--43581
40
3.7
39
85
8
170
27
20
25
26
1.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
43428--43614
78
2.4
77
77
13
177
28
19
25
25
1.99

Tables:   1

The End!