Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1391
Parameters: 2 7 7 80 10 50 1000
Length:  10637

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
211--561
42
8.4
42
91
4
516
31
21
21
25
1.98
986--1052
20
3.3
21
87
6
95
1
41
19
37
1.61
6473--6607
9
15.8
9
70
16
63
30
3
23
42
1.72
6475--6587
18
6.5
18
67
11
74
30
3
24
40
1.72
6473--6587
53
2.2
51
96
3
212
31
3
24
40
1.72
6574--6644
24
3.0
24
72
6
72
26
7
15
50
1.69
6493--6666
48
3.5
48
80
7
149
29
5
21
43
1.74
7859--7883
13
1.9
13
100
0
50
52
8
16
24
1.70
8024--8222
69
2.8
70
93
4
339
50
18
6
25
1.69
8524--8571
22
2.1
23
92
3
80
41
22
8
27
1.82
9549--9580
8
4.2
8
92
7
50
43
34
0
21
1.53
9734--9768
14
2.5
14
90
0
52
40
42
0
17
1.49
9956--10627
113
6.0
114
74
8
473
27
22
18
31
1.97
9958--10586
114
5.6
113
72
10
317
27
22
18
31
1.97

Tables:   1

The End!