Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3322
Parameters: 2 7 7 80 10 50 1000
Length:  41290

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
799--979
40
4.6
39
82
6
197
25
27
20
26
1.99
911--988
40
1.9
41
82
10
97
26
28
20
24
1.99
8665--8845
40
4.6
39
82
6
188
25
27
21
25
1.99
8777--8854
40
1.9
41
82
10
97
26
28
21
23
1.99
15953--15990
16
2.5
15
87
8
51
36
2
15
44
1.61
18453--18485
5
7.0
5
93
6
52
78
0
0
21
0.75
22439--22866
47
9.1
47
94
1
678
32
9
29
28
1.88
24927--25025
43
2.3
43
98
0
189
23
14
34
28
1.93
25015--25084
29
2.4
29
88
9
99
28
17
30
24
1.97
25474--25706
40
5.9
40
89
3
348
26
21
27
24
1.99
25395--25706
80
3.9
79
86
5
384
25
22
27
24
2.00
30306--30453
39
3.7
41
82
8
164
25
26
21
27
1.99
30229--30446
39
5.4
39
72
18
137
26
25
21
27
1.99
30229--30446
80
2.8
74
80
13
208
26
25
21
27
1.99
30839--30904
29
2.3
29
89
7
100
24
30
16
28
1.97
30897--30992
43
2.3
41
89
8
142
29
34
14
21
1.93
33075--33442
46
8.0
47
86
10
496
29
28
8
33
1.86
33075--33442
94
4.0
93
86
10
492
29
28
8
33
1.86

Tables:   1

The End!