Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1705
Parameters: 2 7 7 80 10 50 1000
Length:  41195

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
620--720
41
2.4
43
95
3
179
21
15
35
26
1.94
702--775
29
2.6
29
89
4
105
25
16
32
25
1.96
1084--1319
40
5.9
40
86
2
269
23
23
28
25
2.00
1084--1319
120
2.0
120
83
3
296
23
23
28
25
2.00
4819--5406
47
12.4
47
91
3
849
31
9
29
29
1.88
4819--5406
280
2.1
285
88
3
882
31
9
29
29
1.88
5524--5602
37
2.1
37
90
0
122
24
18
31
25
1.98
7158--7281
46
2.7
47
85
5
146
24
27
20
28
1.99
9465--9499
18
1.9
18
88
0
52
14
31
42
11
1.81
11104--11152
21
2.3
21
89
6
73
12
38
32
16
1.86
14182--14310
29
4.5
29
87
2
163
34
25
11
28
1.91
22887--23016
42
2.9
43
85
6
154
35
33
15
15
1.89
22897--23016
48
2.7
42
84
7
141
35
34
15
15
1.88
24178--24299
43
2.8
43
82
2
129
27
16
23
32
1.96
26275--26368
27
3.4
28
88
5
111
27
11
26
34
1.91
26299--26368
27
2.6
27
95
2
122
30
12
25
31
1.93
26301--26381
27
3.0
27
87
5
92
32
12
22
33
1.91
32642--32689
21
2.2
22
77
3
53
29
25
2
43
1.66
34796--34824
13
2.2
13
100
0
58
24
34
20
20
1.97
38185--38209
13
1.9
13
100
0
50
48
0
40
12
1.40

Tables:   1

The End!