Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1621
Parameters: 2 7 7 80 10 50 1000
Length:  39382

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13257--13303
20
2.3
20
85
0
67
29
36
12
21
1.91
15766--15800
18
1.9
18
88
11
54
57
0
20
22
1.41
23393--23439
20
2.3
20
85
0
67
29
36
12
21
1.91
24439--24511
29
2.5
30
88
6
105
38
19
20
21
1.94
26286--26348
33
1.9
33
84
12
85
12
26
6
53
1.62
26346--26401
21
2.7
21
72
5
51
8
17
1
71
1.21
26345--26401
14
4.1
14
75
16
57
8
17
1
71
1.19
26363--26465
18
5.6
18
72
7
82
6
17
3
71
1.23
26363--26469
6
17.7
6
68
7
65
6
17
3
71
1.22
30227--30261
18
1.9
18
88
11
54
57
0
20
22
1.41
38038--38100
11
6.0
10
73
23
58
77
1
17
3
0.97
38038--38100
5
12.0
5
76
18
58
77
1
17
3
0.97
38038--38098
22
2.8
20
85
9
77
78
1
16
3
0.96
38148--38178
12
2.6
12
100
0
62
45
12
16
25
1.83
38181--38205
12
2.1
12
100
0
50
76
0
16
8
1.02
38175--38230
18
3.1
18
79
5
60
69
1
19
8
1.24
38181--38262
30
2.7
31
84
5
114
64
0
21
13
1.28

Tables:   1

The End!