Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3386
Parameters: 2 7 7 80 10 50 1000
Length:  35146

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6033--6316
40
7.1
40
89
3
362
27
26
22
23
2.00
6033--6320
119
2.4
120
86
6
381
27
26
22
23
2.00
9928--10132
103
2.0
102
99
0
401
26
21
24
27
1.99
12846--12886
22
1.9
21
85
5
55
19
17
14
48
1.81
13154--13213
21
3.0
20
83
7
77
20
25
18
36
1.94
13424--13457
13
2.6
13
95
0
59
32
0
5
61
1.20
16418--16449
11
3.0
11
95
4
57
28
18
15
37
1.92
16410--16449
21
1.9
21
90
10
64
32
17
12
37
1.87
16410--16455
10
4.6
10
87
12
60
34
17
10
36
1.85
23008--23166
43
3.7
43
73
11
130
24
17
23
33
1.96
24997--25201
27
7.6
27
86
3
241
29
28
15
26
1.96
24997--25200
54
3.8
54
84
3
266
29
28
15
25
1.96
32877--33054
27
6.6
27
84
3
205
29
28
15
26
1.96
32898--33053
82
1.9
81
88
3
233
29
28
15
26
1.96

Tables:   1

The End!