Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold263
Parameters: 2 7 7 80 10 50 1000
Length:  13530

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6141--6367
9
24.6
9
75
10
145
38
0
13
47
1.49
6141--6367
18
12.3
18
76
10
163
38
0
13
47
1.49
6117--6337
113
1.9
114
86
4
313
38
0
13
47
1.49
6141--6371
86
2.6
88
75
15
240
38
0
12
47
1.48
6141--6380
95
2.8
84
72
17
211
39
1
12
47
1.50
6472--6527
15
3.8
15
78
21
73
53
0
0
46
1.00
6705--6771
24
2.8
24
86
10
102
46
7
17
28
1.75
6969--7013
22
2.0
22
100
0
90
48
4
4
42
1.43
7083--7142
7
8.4
7
74
17
52
61
1
0
36
1.06
7082--7145
15
4.4
15
75
15
71
62
1
0
35
1.05
7075--7143
15
4.7
15
72
15
56
62
1
0
36
1.04
7082--7153
20
3.5
20
77
17
83
62
2
0
34
1.10
7075--7164
43
2.1
44
97
2
173
62
2
0
35
1.08
7090--7165
16
5.2
14
73
19
66
63
2
0
34
1.09
11919--11963
10
4.3
10
83
10
63
42
0
0
57
0.98
11950--11981
15
2.1
15
94
0
55
31
9
0
59
1.29
11921--11971
22
2.3
23
79
6
68
41
1
0
56
1.10
12840--12873
14
2.4
14
90
9
52
44
23
0
32
1.54
13029--13205
81
2.2
80
96
1
327
16
23
24
35
1.95
13027--13233
81
2.6
80
90
3
326
18
22
24
35
1.96
13029--13205
40
4.4
40
96
1
327
16
23
24
35
1.95
13026--13244
121
1.8
121
89
4
343
18
22
24
35
1.96

Tables:   1

The End!