Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold943
Parameters: 2 7 7 80 10 50 1000
Length:  39020

Tables:   1   

This is table  1  of  1  ( 31 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4193--4259
21
3.1
21
82
4
71
34
32
2
29
1.73
7738--7769
16
2.0
16
93
0
55
12
9
25
53
1.68
12169--12215
20
2.3
20
85
0
67
21
12
36
29
1.91
16612--16658
20
2.3
20
85
0
67
21
12
36
29
1.91
26125--26156
16
2.0
16
100
0
64
12
12
25
50
1.75
26344--26491
72
2.0
73
84
3
192
25
16
29
29
1.97
28413--28466
20
2.7
20
82
0
63
24
20
18
37
1.94
28413--28486
30
2.5
30
86
8
98
21
20
18
39
1.93
28413--28477
20
3.2
20
71
16
53
23
21
16
38
1.93
31168--31201
11
3.2
11
91
4
52
79
5
14
0
0.91
31177--31273
6
15.8
6
68
8
61
70
3
19
7
1.25
31155--31228
18
4.1
18
77
8
78
70
5
17
6
1.29
31234--31271
13
2.8
13
82
17
51
73
0
18
7
1.06
31235--31285
21
2.4
21
74
6
50
74
1
17
5
1.11
31288--31350
33
1.9
33
84
12
85
55
6
25
12
1.60
33127--33180
20
2.7
20
82
0
63
24
20
18
37
1.94
33127--33200
30
2.5
30
86
8
98
21
20
18
39
1.93
33127--33191
20
3.2
20
71
16
53
23
21
16
38
1.93
34813--34845
11
3.0
11
83
16
50
72
6
12
9
1.26
34779--34863
33
2.6
30
74
18
71
69
3
12
14
1.32
35873--35976
6
17.3
6
67
10
52
71
3
18
6
1.24
35873--35924
11
4.6
11
76
9
52
75
5
15
3
1.14
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
35876--35931
17
3.3
17
82
7
69
71
7
16
5
1.27
35940--35989
14
3.6
14
82
12
59
74
2
18
6
1.12
35939--35995
27
2.2
26
87
9
80
70
1
19
8
1.23
35939--35995
13
4.3
13
77
14
55
70
1
19
8
1.23
35992--36053
33
1.9
32
87
9
90
54
6
25
12
1.62
37827--37880
20
2.7
20
82
0
63
24
20
18
37
1.94
37827--37900
30
2.5
30
86
8
98
21
20
18
39
1.93
37827--37891
20
3.2
20
71
16
53
23
21
16
38
1.93
38057--38114
29
2.0
30
82
3
73
31
3
10
55
1.50

Tables:   1

The End!