Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2842
Parameters: 2 7 7 80 10 50 1000
Length:  42094

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1437--1543
34
3.2
34
81
1
90
30
25
18
25
1.98
19031--19060
12
2.5
12
94
0
51
26
46
16
10
1.78
23498--23607
42
2.5
42
82
4
112
23
13
27
35
1.93
23498--23620
43
2.9
43
81
3
131
26
14
26
33
1.94
23525--23620
42
2.3
42
83
1
120
28
15
25
31
1.96
23481--23631
43
3.5
43
74
11
130
24
16
27
31
1.96
28561--28691
27
4.9
27
78
9
124
33
19
23
23
1.97
28577--28691
54
2.1
53
84
6
142
35
20
22
21
1.96
29178--29300
27
4.6
27
84
8
160
29
19
15
35
1.93
29163--29300
54
2.6
54
86
5
174
29
21
14
34
1.93
29296--29388
27
3.4
27
77
0
96
31
4
23
40
1.74
31930--32129
8
25.6
8
66
20
61
58
0
5
35
1.25
32050--32099
5
10.0
5
75
16
50
64
0
2
34
1.05
32012--32129
26
4.8
24
77
15
89
60
0
4
34
1.22
32112--32169
25
2.2
26
82
11
66
60
3
1
34
1.24
33887--34472
206
2.8
206
90
0
895
28
23
18
30
1.97
36078--36262
40
4.7
40
81
5
196
26
28
20
24
1.99
36045--36262
40
5.5
39
77
7
174
25
27
20
26
1.99

Tables:   1

The End!