Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold419
Parameters: 2 7 7 80 10 50 1000
Length:  30896

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4254--4288
12
3.0
12
91
4
54
68
14
5
11
1.37
4330--4380
13
3.9
13
90
10
86
62
0
13
23
1.31
4330--4380
26
1.9
27
96
4
95
62
0
13
23
1.31
5315--5365
18
2.8
18
83
13
61
68
1
21
7
1.25
5335--5375
19
2.2
19
86
8
57
60
2
29
7
1.36
20536--20596
20
3.0
19
77
13
59
6
8
3
81
0.95
20536--20596
22
3.0
21
79
9
63
6
8
3
81
0.95
22917--22951
13
2.7
13
90
0
52
45
0
11
42
1.40
23174--23237
23
2.8
23
92
4
103
23
12
20
43
1.85
28654--28688
18
1.9
18
88
11
54
22
20
0
57
1.41
29560--29639
31
2.7
29
79
11
81
8
7
3
80
1.02
29589--29628
18
2.2
18
86
8
55
5
7
5
82
0.94
29562--29658
27
3.4
28
74
13
74
11
8
4
76
1.14

Tables:   1

The End!