Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2916
Parameters: 2 7 7 80 10 50 1000
Length:  25138

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5442--5664
40
5.6
39
81
5
198
26
27
20
25
1.99
5442--5588
79
1.9
80
89
1
233
27
27
20
25
1.99
5440--5664
80
2.8
79
83
4
247
27
27
20
24
1.99
5442--5664
120
1.9
119
82
4
279
26
27
20
25
1.99
9159--9208
6
8.2
6
81
16
50
2
20
2
76
0.99
9148--9218
37
1.9
37
86
11
101
2
18
2
76
1.04
9144--9204
16
3.8
16
77
14
63
3
19
1
75
1.03
10136--10180
13
3.6
13
80
17
51
4
11
4
80
1.01
10149--10192
11
3.8
12
85
8
56
6
9
4
79
1.04
10149--10214
23
2.8
24
76
2
71
7
12
4
75
1.16
10160--10199
12
3.2
12
89
10
55
12
5
7
75
1.18
11913--12009
30
3.2
30
75
2
106
28
15
26
28
1.96
20610--20663
23
2.2
25
78
15
60
62
3
22
11
1.43

Tables:   1

The End!